PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678321642
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 787aa    MW: 87372.5 Da    PI: 7.3147
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678321642genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11597643455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  ErrRR+ri +++ +L++l+  +      Kl+Ka+ L  +++YIksLq
  678321642 597 VHNLSERRRRHRITKKMRTLQKLISDS-----HKLDKASLLDDTIHYIKSLQ 643
                5***********************997.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd066606.29E-8637350IPR023210NADP-dependent oxidoreductase domain
SuperFamilySSF514301.83E-7437351IPR023210NADP-dependent oxidoreductase domain
Gene3DG3DSA:3.20.20.1001.1E-8237354IPR023210NADP-dependent oxidoreductase domain
PfamPF002486.4E-6149351IPR023210NADP-dependent oxidoreductase domain
PRINTSPR000692.5E-683107IPR020471Aldo/keto reductase
PROSITE patternPS000620182199IPR018170Aldo/keto reductase, conserved site
PRINTSPR000692.5E-6182199IPR020471Aldo/keto reductase
PROSITE profilePS5088815.288593642IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-15594650IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.67E-14596647No hitNo description
Gene3DG3DSA:4.10.280.106.5E-14596647IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-9597643IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.0E-15599648IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0009535Cellular Componentchloroplast thylakoid membrane
GO:0009941Cellular Componentchloroplast envelope
GO:0010287Cellular Componentplastoglobule
GO:0016491Molecular Functionoxidoreductase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    Send to blast
MALQLCGACC PALTRTKIVA VRSVAETGAV KPAEEEKVKL GGSDLKVTKL GIGAWSWGDT  60
TYWNNFEWDD RKLKAAKSAF DASIDSGITL FDTAEVYGSR MSFGAISSET LLGRFIRERK  120
ERDPDVEVAV ATKYAALPWR LGRQSVIAAL KDSLSRLGLT SVELYQLHWP GIWGNEGYID  180
GLADAVEQGL VKAVGVSNYS EKRLRDAHKQ LKKRGVPLAS NQVNYSLIYR IPEENGVKAA  240
CDELGITLIA YSPLAQGALT GKYTPERTPS GPRGQIYTPE VMRKLQPLIN KIKEIGDGYG  300
KTPTQVVLNW LVAQENVVPI PGARNSVQAE EFAGALGWRL SDDEVEELRS MASERVEGIH  360
SSLWCRFLCD FLAECLGMAA YGHTEVNAEC PLLLLPFRRH PFGVEDEVME ILWQDGEAVL  420
QRHSQRNPNE QAPWVDEDDP LKSLDLLSGV PTPHLAEPNT VPDVEEAFPF LIQLPPPEAA  480
VSDGEQGFAT DSSVMTVEVS SGSSSQIGIE ANKSSVGSES IVAPVNPRSS SIEKELTEPE  540
RTSFRVSASN HNERKKRKIK DLKEFKKSPS QDSQMEAPRG ENRAPQKSTR WGRVAEVHNL  600
SERRRRHRIT KKMRTLQKLI SDSHKLDKAS LLDDTIHYIK SLQSQLQWWM GSGIAQMRVL  660
QQLCHAGIEM RPPTLPSMED FMHPSKFPLV GLLPPPLMGH GYMPNPFSYR NQMQMPPEQN  720
PEHTAVHFVP NAQPVNAFSF SSHAAQANQC SYMRTAMQYP HPLVHRIKVS GNTPINQPRV  780
VKTGAII
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dan_A3e-293935252742,5-diketo-D-gluconic acid reductase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678321642
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.43e-18phytochrome interacting factor 3-like 6