PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678322107
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 249aa    MW: 27723.5 Da    PI: 6.661
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678322107genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.3e-0932532345
                     -HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwq 45
                     +W+ Ia++++ gRt++++k++w+
        678322107 32 RWAQIAKHLP-GRTDNEVKNFWN 53
                     6*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.25E-73161IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-113160IPR009057Homeodomain-like
PROSITE profilePS500906.5283256IPR017877Myb-like domain
PfamPF002498.6E-73254IPR001005SANT/Myb domain
CDDcd001677.72E-73253No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MSLETGRIIF PTIYLTWKFR SCMPNSDFHF CRWAQIAKHL PGRTDNEVKN FWNSSIKKKM  60
FSMQNQTRFS TGSISDNLYF LNPNTSLIQN DQFSVPAPVQ GCFDDAGRLN QPMVCNPDPN  120
IPFSHPPLSC GNPSTLLVKH NEGSLPGFDW LKIHHLDHLN SFILDNLPAT HYVPSNFDDH  180
SLDEFLGIPK LSCASQVDYI ESVMASLVST TTVACLTTPP PESTLSPVHP ATTSPLRTIV  240
CAGSQSPEK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678322107
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.28e-14myb domain protein 26