PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678322171
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 359aa    MW: 40137.9 Da    PI: 7.7382
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678322171genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.62.2e-32199255258
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                +Dgy+WrKYGqK vk+s+fprsYY+Ctsa+C+vkk+vers ed ++v++tYeg+H+h
  678322171 199 EDGYRWRKYGQKAVKNSPFPRSYYKCTSASCKVKKRVERSCEDSSIVVTTYEGQHTH 255
                8******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-33183256IPR003657WRKY domain
SuperFamilySSF1182905.23E-28190258IPR003657WRKY domain
PROSITE profilePS5081130.469193258IPR003657WRKY domain
SMARTSM007744.4E-37198257IPR003657WRKY domain
PfamPF031061.1E-25199255IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MQLRGRQRCT TGWPHRARLR RHGPSVSTWG FTLTSTFSTS QRQRQKPDAC FGAIKPLSYS  60
VLDTRNRLLQ GSSPDSRFFL KELATHFHLY SSAAGEMELQ NLPTSPFFDF GFNEDQMSAS  120
LDLAEVLGDE FLPSGCDAAL IPETEEEVEM NSDSSLNSKE KAGNRRGSSL KVKAGKINKK  180
KERQPRVAFM TRTEIDHLED GYRWRKYGQK AVKNSPFPRS YYKCTSASCK VKKRVERSCE  240
DSSIVVTTYE GQHTHLCPPV TAVVAAAAVM AQPLQSSCFS SSPWEDELAS TQNQAPRSFT  300
APMNSGFTSL TTTTTTNSSS SEAHQVYSCD GSPDLFDGLL EDLVQTWPMQ DDLWLRNLH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-26186259275WRKY transcription factor 1
Cis-element ? help Back to Top
SourceLink
PlantRegMap678322171
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13092479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-44WRKY DNA-binding protein 23