PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678325059
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 297aa    MW: 33049.1 Da    PI: 7.3125
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678325059genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.4e-051662071055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                + RR++iN+++  L++l+P +     k +  a +L   ++Y++sLq
  678325059 166 QIRREKINEKLRCLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 207
                78******************8....355888888888888888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.966156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0018162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-11166217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.19E-7166210No hitNo description
SuperFamilySSF474597.59E-12166224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MHHQFNASVS TTQEEGSYRP CFHRVSPSNI DRFAGYRQLQ PHPTCLLEDE GSRQIGPSYP  60
IFHPSQPFFS SGTTTDMIQE PDVFDPAVSQ SGSLKQNCDG KKRKRMSHGE GETPREVVHV  120
RAKRGQATDS HSLAERVCIH HLSTSLCSTS PFVTDIRSSS GKKKTQIRRE KINEKLRCLQ  180
DLVPGCYKTM GMAVMLDVII NYVRSLQNQI DFLSMKLSAA SLFYDFNSLD GESTAAQPLH  240
VSCKNEALEL VSKRWPFFAD AAAFHQGNVD GDEGAGPRVD DGVYGGIPCY YPPSWSL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678325059
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078318.24e-61transcription factor bHLH75
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA90691724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-46bHLH family protein