PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678327393
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 180aa    MW: 20109 Da    PI: 8.2136
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678327393genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.9e-051436123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               y C++C + F++k  L  H++ H
  678327393 14 YGCKYCERKFTNKQALGGHQNAH 36
               67******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.8E-41039IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576672.83E-61141No hitNo description
PROSITE profilePS5015711.4481441IPR007087Zinc finger, C2H2
PROSITE patternPS0002801636IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MNPGEENNEQ DREYGCKYCE RKFTNKQALG GHQNAHKLER AVDKGANTSQ QVNFTYSSGS  60
SSTYPVPGNP VPFLGYFSRS HEFMPRFIPR NTFPYHQPGF GVQPRPFSAY NGPRWTAPRS  120
SYMRPHPPSY PFGPNGTTQP PSYAFGANGS PFSTAPLIQA TLDDQHDNSD DSNLDLSLRL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678327393
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGMigut.J01617.1.p8e-17(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13342714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.12e-11zinc finger protein 2