PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678328642

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 245aa MW: 26436.4 Da PI: 10.3738

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678328642	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.5	1.4e-38	74	133	4	63
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 + lkcprC s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGg++rknk+sss 678328642 74 SPLKCPRCTSPNTKFCYYNNYSLSQPRYFCKNCRRYWTEGGSLRNVPVGGSSRKNKRSSS 133 6789****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-22	62	123	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.4E-33	75	130	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.817	76	130	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	78	114	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence Send to blast
MGSGRRELAK APGMASSPSR PRFPCSIPSS LGPRHHGSSA MDSSWWPQGT GAGVVFDQTT 60 AAASEKKPNP PNASPLKCPR CTSPNTKFCY YNNYSLSQPR YFCKNCRRYW TEGGSLRNVP 120 VGGSSRKNKR SSSSSSSSSS SPSASKKPAP DLNPQTLVLK NPKPQNQNVG YNPFHFNNPL 180 PVAATPWELF KSGTFSSTGC DASSHPKGFS TTQNMFDARS GFPFGGNEEE ANGRWNLDGS 240 IKFLV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678328642

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022844511.1	3e-41	dof zinc finger protein DOF4.6-like isoform X2
TrEMBL	A0A4D8ZWA9	3e-38	A0A4D8ZWA9_SALSN; Uncharacterized protein
STRING	Migut.F00184.1.p	8e-38	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-31	DOF zinc finger protein 1