PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678329945
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 310aa    MW: 34409.1 Da    PI: 4.8595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678329945genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.59.9e-13137184355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ah ++ErrRR+++ + f  L  l+P +     kK++K+++Le A++++k+Lq
  678329945 137 HAHIMAERRRREQLSQLFIALSALIPGL-----KKMDKSSVLEDAIKHMKQLQ 184
                58**************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.885134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-17134201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-10137184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-15138195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-13138188No hitNo description
SMARTSM003531.8E-13140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516719.025243310IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MHDWVVFVVA FLGLRSMYPE NLSDFMDSLY DEDLDAAAFG QDIHNYLSHP GNSVISSTTG  60
SSSIASWFGS PVVDDPTKHC IIPPEFAFAG APENPPQGGI LPINTENPAQ AYEDGGFEEA  120
PSLPKRRTRT RPPSQTHAHI MAERRRREQL SQLFIALSAL IPGLKKMDKS SVLEDAIKHM  180
KQLQERVKKL EEMAERRSME SVIIVKRSQI VVGDEEENGD ENNGVEERTL PEIEARVCDN  240
RMLLRVQCEK HKGILANLLS KIESLGVIVV NTNATPFGDI ALDITIVAEV EKELNLTASQ  300
VVAVVREALR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124146KRRTRTRPPSQTHAHIMAERRRR
2142147ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678329945
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073652.11e-85transcription factor bHLH18-like
TrEMBLA0A2G9GXQ61e-87A0A2G9GXQ6_9LAMI; Uncharacterized protein
STRINGGorai.003G034700.14e-62(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-46bHLH family protein