PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678331795
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 263aa    MW: 29849.9 Da    PI: 8.3499
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678331795genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY41.52.6e-13123151230
                --SS-EEEEEEE--TT-SS-EEEEEE-ST CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa 30 
                +Dg+nWrKYGqK++kgs+fprs   C + 
  678331795 123 SDGWNWRKYGQKPIKGSPFPRSHLLCFFL 151
                7*********************9999765 PP
2WRKY505.8e-161682072159
                -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 r+YYrC+s+  C ++k+ver+++dp+++ +tY++eHnh+
  678331795 168 RRGYYRCSSSkACVARKQVERDRSDPDMFLVTYTSEHNHP 207
                599*****9989***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-27115209IPR003657WRKY domain
PROSITE profilePS5081128.598117209IPR003657WRKY domain
SuperFamilySSF1182901.83E-10119151IPR003657WRKY domain
SMARTSM007745.9E-32122208IPR003657WRKY domain
PfamPF031061.2E-8124149IPR003657WRKY domain
SuperFamilySSF1182907.06E-13167209IPR003657WRKY domain
PfamPF031061.3E-12168207IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MDDDWDLHAV VRSCCASSAV ISQPPPSSFL GCGVSEPCFR ISSQPREELR DLCVPFVSNW  60
REAQEEDGLL KPLPQPLFSK QKPAGFSGGA KSDSLKNSAR KCKKKRSLMK KQICRVDAEK  120
LSSDGWNWRK YGQKPIKGSP FPRSHLLCFF LQTQKKMNFD GFLFAIVRRG YYRCSSSKAC  180
VARKQVERDR SDPDMFLVTY TSEHNHPPPF DRNSFQTTAR ATPKPDLEKT EAHDKQMDKD  240
EGDSVISDMA PDDCFFMSME DPS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678331795
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-46WRKY family protein