PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678334563
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 208aa    MW: 22281.3 Da    PI: 8.9327
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678334563genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.41.5e-3544115374
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasece 74 
                +k ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+++i+++tgt+s ++++++
  678334563  44 TKSSTTKDRHTKVNGRGRRVRMPALCAARVFQLTRELGHRSDGETIEWLLKHAEKSIIAATGTGSLPSEAVS 115
                57889**********************************************************888884441 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.4E-3148139IPR005333Transcription factor, TCP
PROSITE profilePS5136926.95549103IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MTSSDIFVQI AGPDVPPPPS SGHDVGPANS RPKLAVSRKT TRGTKSSTTK DRHTKVNGRG  60
RRVRMPALCA ARVFQLTREL GHRSDGETIE WLLKHAEKSI IAATGTGSLP SEAVSTSSTL  120
PPSSPVLSVH APVSMPLMQI ALHSVTPIHG IGGNSFELPH TDPSCRLDLC HHHSPPSHVH  180
PEFLGYRQIP FTALLLQPAT AEEEVDGK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678334563
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553454.12e-61transcription factor TCP11-like
TrEMBLA0A2G9FXY72e-58A0A2G9FXY7_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000555411e-53(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.16e-30TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14