PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678334805
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 244aa    MW: 27705.8 Da    PI: 4.4809
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678334805genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84e-1367110755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er+RR+++N+++  Lr+++P+      +K++Ka+i + A+ YI+sLq
  678334805  67 VSERNRRKKLNERLYALRSVVPNI-----TKMDKASIIKDAISYIQSLQ 110
                57*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.46960109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.16E-1363114No hitNo description
SuperFamilySSF474591.57E-1764130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-1566115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-1766125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-1067110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MDSNEDVYNT YWENNMFHEY EEFDSYFDDP LSGCNDSSLE EQHCSYNYED TSSPDGAQSL  60
LESKNIVSER NRRKKLNERL YALRSVVPNI TKMDKASIIK DAISYIQSLQ VEEKRIQDEI  120
KELESGRHHS NGITVHREGA SFSSNKNTAR SPFPPIELLE LRVTSMGQGT IIVSMTCSEG  180
RETIVQLCEI FESLKLRVIT DSIIASSGKL IKTVFIEGDE EETENIRMKI EAAVAAANDG  240
KRDE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678334805
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094111.11e-86transcription factor bHLH35 isoform X1
RefseqXP_011094112.11e-86transcription factor bHLH35 isoform X1
SwissprotQ2HIV91e-65BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2G9GQW61e-91A0A2G9GQW6_9LAMI; Uncharacterized protein
STRINGXP_009603227.15e-80(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-68bHLH family protein