PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678335706
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 387aa    MW: 43130.4 Da    PI: 7.7682
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678335706genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00156785321
               ETTTTEEESSHHHHHHHHH CS
    zf-C2H2  3 CpdCgksFsrksnLkrHir 21
               C++Cgk F ++ ++ +H +
  678335706 67 CENCGKEFLSWKSFLKHKK 85
               *****************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.31E-51037No hitNo description
PROSITE profilePS501579.9721138IPR007087Zinc finger, C2H2
SMARTSM003555.21133IPR015880Zinc finger, C2H2-like
PfamPF139123.3E-51235IPR007087Zinc finger, C2H2
PROSITE patternPS0002801333IPR007087Zinc finger, C2H2
PROSITE profilePS501578.8916592IPR007087Zinc finger, C2H2
SMARTSM00355726585IPR015880Zinc finger, C2H2-like
PfamPF139123.9E-10189214IPR007087Zinc finger, C2H2
SuperFamilySSF576671.27E-7189212No hitNo description
PROSITE profilePS5015710.284190217IPR007087Zinc finger, C2H2
SMARTSM003550.098190212IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280192212IPR007087Zinc finger, C2H2
SuperFamilySSF576671.27E-7254281No hitNo description
PfamPF139126.0E-14259282IPR007087Zinc finger, C2H2
PROSITE profilePS501578.912259281IPR007087Zinc finger, C2H2
SMARTSM003550.28259281IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280261281IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MDQEQQPRFK HFCRICNKGF MCGMALGGHM RAHRAEDEDP GSDSEEVPGE NKRMYQLRDR  60
LKSCRNCENC GKEFLSWKSF LKHKKCNSDE ASGSLISSPD SEFDNEDDAG DRAGWSKRKR  120
SMRLSVASNS FPTPEDDIFL ATCLVQLANA TPIDMEESSA STSRDWERRN PSFETPVAKR  180
LPTMNSKGVF ECRACNKVFN SHQALGGHRA SHRKVKGCYA SKMDQIQEEG DIKEESLPSK  240
STSPNKIDTG REAKKMKIHE CSICHRVFPT GQALGGHKRC HWIAQNIPET SSTPPKFHFS  300
NKSNTLLPDR IDLNAPAWTA ASGLEVPTEM HLGSPGGPKI MRLSTQYPEK KGNDCNLKEL  360
KEETSNCGTS QWLQVGIGST NEAAADL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678335706
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090189.11e-124uncharacterized protein LOC105170939
TrEMBLA0A2G9HTX71e-118A0A2G9HTX7_9LAMI; Uncharacterized protein
STRINGXP_002511650.11e-108(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19102243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.11e-28C2H2-like zinc finger protein