PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678336706
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 217aa    MW: 23717 Da    PI: 10.3321
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678336706genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.23.7e-1364108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I++   k+Rt+ q+ s+ qky
        678336706  64 PWTEEEHKLFLIGLRRVGKGDWRGISKNYVKTRTPTQVASHAQKY 108
                      7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.98757113IPR017930Myb domain
SuperFamilySSF466895.08E-1758112IPR009057Homeodomain-like
TIGRFAMsTIGR015578.2E-1660111IPR006447Myb domain, plants
SMARTSM007171.4E-761111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.8E-1064108IPR009057Homeodomain-like
PfamPF002498.3E-1164108IPR001005SANT/Myb domain
CDDcd001673.78E-964109No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MSTGAREILL FGVRLNVDPM RKCVSMNNLS EYEEIPPKDA SAASADDFAP LSAGGARGRK  60
RGIPWTEEEH KLFLIGLRRV GKGDWRGISK NYVKTRTPTQ VASHAQKYFL RHSINVHHRR  120
RRRSSLFDMI AETVISNGDG KNQQKGVGAT PPPPPVTGNI TGIPVAVPIP HALLICPAAS  180
TTETEDPKIK QTEQHQQQPL SLSLSLSSAQ DQIISVG
Cis-element ? help Back to Top
SourceLink
PlantRegMap678336706
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071772.12e-50transcription factor MYB1R1
TrEMBLA0A4D8YFX11e-54A0A4D8YFX1_SALSN; Uncharacterized protein
STRINGXP_010532298.13e-48(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25742351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-43MYB_related family protein