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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | 678339240 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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| Family | G2-like | ||||||||
| Protein Properties | Length: 173aa MW: 19381 Da PI: 10.5944 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 44.5 | 3.3e-14 | 102 | 132 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+AtPk+i+elmk +gL+ +++kSHLQkYRl
678339240 102 TVATPKRIKELMKEDGLSSDEIKSHLQKYRL 132
57****************************8 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF46689 | 1.79E-5 | 102 | 135 | IPR009057 | Homeodomain-like |
| TIGRFAMs | TIGR01557 | 2.3E-12 | 103 | 133 | IPR006447 | Myb domain, plants |
| Gene3D | G3DSA:1.10.10.60 | 2.8E-11 | 103 | 135 | IPR009057 | Homeodomain-like |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 173 aa Download sequence Send to blast |
MSGGNERTRR RISKDYVQGL EKERCKIQMF QRELPLSFEL VTKDFAAHRS SSGTRRYVAG 60 DRGRKKEAAD GREDTEEDKE KLVAGAAPKI LTRTGTPRRI ATVATPKRIK ELMKEDGLSS 120 DEIKSHLQKY RLQATKRPSV ATAQPPQQVA PDGIWVPPEF TSKATTTAPE SNK |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | 678339240 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G03500.1 | 3e-18 | G2-like family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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