PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678347392

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 243aa MW: 26169.3 Da PI: 9.1451

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678347392	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.7	2.3e-37	46	101	5	60
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++cprC+s +tkfCyynnysl+qPry+CkaCrryWt+GG+lrnvP+Ggg+rknk+ 678347392 46 PQSCPRCNSGDTKFCYYNNYSLAQPRYYCKACRRYWTHGGSLRNVPIGGGSRKNKR 101 579***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-23	42	101	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.388	47	101	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-32	47	101	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	49	85	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MNSSEKVAMD SGKGVGSFTT AERNRPVRSS PGNFREDRLN CQPPLPQSCP RCNSGDTKFC 60 YYNNYSLAQP RYYCKACRRY WTHGGSLRNV PIGGGSRKNK RGKPTAECEV PPTSSQSLMG 120 LLPGVPSIRR LPAAVPPVGN SFFAGGTHMS FPAVPSLMNQ SVKLLYGQNM GFLQSTNLCF 180 RNTPATQFQT PAPDQYTPWA HEGYMGSAGA AASAGCNSDA GGNHASSSFI ANQWPDCDHG 240 FNP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678347392

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096324.2	2e-41	dof zinc finger protein DOF3.1
TrEMBL	A0A2G9GQ55	1e-38	A0A2G9GQ55_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00940.1	3e-31	Dof family protein