PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678347887

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 240aa MW: 27309 Da PI: 6.1709

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678347887	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	52.6	1e-16	66	116	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Wt+eLHe+F e+ +L ++ Pk ile m v+gLt+ +++SHLQk R 678347887 66 EWTQELHEKFEEVAYRLAKVDRCFPKDILEEMRVPGLTRMQIASHLQKCRN 116 7***********************************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.5E-16	61	116	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.94E-12	61	115	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.1E-15	65	116	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MDEDDGELTA MALDSGVYLC IKRPVEVEMA EYMWQYVFRE KLSKRQKESR EEKRVQGNVK 60 KKVWTEWTQE LHEKFEEVAY RLAKVDRCFP KDILEEMRVP GLTRMQIASH LQKCRNEAWV 120 PPGERRSRHP REKAAAQPAA PPGSRKRKAF GVMPKISNKT LAKMATLPGD GGAEECHRVR 180 ERDPEDDFIS YREIGSSSWN PLSLGPLNAG GQDSNVPPET GECSLQFGEA LDDFDLSGLL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678347887

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA813	23	84

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62670.1	4e-12	response regulator 20