PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678349257
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 255aa    MW: 29711.7 Da    PI: 9.5044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678349257genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83e-09138179351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV+++    +W A I++      +k+++lg+  + eeAa+++++a+ 
  678349257 138 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVRSQEEAARLYDRAAF 179
                79***966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-4137194IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7137182IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-6144184IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MCKTGEDFVQ SGTPEILGRG SCVRWEACVQ MRRKVKIFRR IREDMVSIRR RKLLASCAEQ  60
KSLKKEDSTE ESRSLNLHPH SEYEFKPKEE AASENGVHSS NVSASSSSKE QVVQQFSEVK  120
RRKRHRRKHI DNQEPCIMRG VYFKNLKWQA AIKVDKKQIH LGTVRSQEEA ARLYDRAAFM  180
CGREPNFELS EEEKQELSKF SWDEFLAMTR LAINSKKSQR RRVKKFNDSP WEGDKENNAC  240
FLPSEDEAND MISAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13151RRKVKIFRRIREDMVSIRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678349257
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089068.16e-79ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A4D8ZWT02e-66A0A4D8ZWT0_SALSN; Uncharacterized protein
TrEMBLA0A4D9BZE03e-66A0A4D9BZE0_SALSN; Uncharacterized protein
STRINGGSMUA_Achr6P06510_0012e-62(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-38ERF family protein