PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678352598
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 295aa    MW: 32440 Da    PI: 7.3257
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678352598genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.4e-091462254
               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               ++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+i   A++ +k+L
  678352598 14 KVQKAGREKLRRDRLNEQFMELGKALDPD----RPKNDKASIIIDAIQMLKDL 62
               5667779*******************997....79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.51E-13981IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-101085IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.4551262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.03E-61366No hitNo description
PfamPF000106.5E-71462IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-51868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MDGEPTDSSN DARKVQKAGR EKLRRDRLNE QFMELGKALD PDRPKNDKAS IIIDAIQMLK  60
DLTGQVGKLK SECASLTEES RELTQEKNDL REEKASLKAD IENLNAQYAQ RVRSMHPWPG  120
MDHSMLMHPT SYGFTVPVPI PTAPIPLHPS VQPYPFFVNQ NSPVVARPGS TFVPYMAHNP  180
SMVEQQSTQH ASQSQVIQHD SRSISSSRHD PRGKSLDMES RIERSDESND VTTDLELKTP  240
GSTSEQTSSP VARTPEKLVR KATRLTGAST SSGCSSSRSS RSISSGSNAD GGHTS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678352598
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092862.11e-133transcription factor bHLH121
SwissprotQ9LT232e-76BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0H3Y7L31e-133A0A0H3Y7L3_SALMI; BHLH transcription factor 10
STRINGSolyc01g111130.2.11e-108(Solanum lycopersicum)
STRINGMigut.N01282.1.p1e-109(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54562434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-74bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]