PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678357610

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 456aa MW: 50048.3 Da PI: 10.7122

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678357610	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.4e-32	214	267	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ 678357610 214 PRMRWTNSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 267 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.27E-15	211	267	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.0E-28	212	267	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.3E-24	214	267	IPR006447	Myb domain, plants
Pfam	PF00249	5.4E-7	215	266	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence Send to blast
MSRDGVFLEL SSSQMPDLSL QISLSNTAAS PKNRQQVQSF DRSVAGIPST DVDAAALATE 60 LSLRTNFEAP KSFNGGNQPD PQNPSRNYTL QTSSTQPIKG IPIYPSTNRP FPFSPLEQKD 120 PKTRFFQMPS WPSIPIPRPY FAGSATLDHH LPMPNLAPSG AGFLYRAGAG GFHQMHPHGQ 180 HPQFGIEGGG GSHHGLHRSR FLPRMQSKRS MRAPRMRWTN SLHARFVHAV ELLGGHERAT 240 PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKPAVSSGH SEGSGGEDEI SVVCGDRPTG 300 VRSFTDQRDP QQDSDTNPRL WSNSSSSREG WLQMNAGEAQ SLVGTTNFSA ASDHLVSSCK 360 KHPRHTQSPG ICSLCLCEKL TQLTTASSKG GKSIRVFVNR SHRILEKSRS MAFGSGRRGD 420 DAKSDDTKNG FLSKLVLRRN KRPLMHSRSI RATGIN

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence Send to blast

MSRDGVFLEL SSSQMPDLSL QISLSNTAAS PKNRQQVQSF DRSVAGIPST DVDAAALATE  60
LSLRTNFEAP KSFNGGNQPD PQNPSRNYTL QTSSTQPIKG IPIYPSTNRP FPFSPLEQKD  120
PKTRFFQMPS WPSIPIPRPY FAGSATLDHH LPMPNLAPSG AGFLYRAGAG GFHQMHPHGQ  180
HPQFGIEGGG GSHHGLHRSR FLPRMQSKRS MRAPRMRWTN SLHARFVHAV ELLGGHERAT  240
PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKPAVSSGH SEGSGGEDEI SVVCGDRPTG  300
VRSFTDQRDP QQDSDTNPRL WSNSSSSREG WLQMNAGEAQ SLVGTTNFSA ASDHLVSSCK  360
KHPRHTQSPG ICSLCLCEKL TQLTTASSKG GKSIRVFVNR SHRILEKSRS MAFGSGRRGD  420
DAKSDDTKNG FLSKLVLRRN KRPLMHSRSI RATGIN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-16	215	269	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-16	215	269	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-16	215	269	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-16	215	269	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678357610

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020551952.1	1e-86	transcription repressor KAN1 isoform X2
TrEMBL	A0A2G9GLA3	1e-99	A0A2G9GLA3_9LAMI; Uncharacterized protein
STRING	XP_009624603.1	2e-73	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2468	23	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	7e-49	G2-like family protein