PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678359899
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 380aa    MW: 42551.4 Da    PI: 6.4682
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678359899genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY52.21.2e-161461822359
                EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                +YYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  678359899 146 NYYRCTTQKCTVKKRVERSYQDPTIVITTYEGQHNHH 182
                6***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007746.4E-10142183IPR003657WRKY domain
SuperFamilySSF1182909.29E-14144184IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-14145184IPR003657WRKY domain
PROSITE profilePS5081117.844146184IPR003657WRKY domain
PfamPF031065.1E-11146182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MSENFEGFYH RHHFHEDSPW TAGLDSTIPA AGGAHRPLMM DPFYHPVEYP YGNEMFHSVK  60
EEEKALTTPA TPNSSISSSS AEATPAGDDA SNKGKKERSL KQIVNEEGEE SSKKEAAKAK  120
KGGKKEKQPR FAFMTKSEVD HLEDGNYYRC TTQKCTVKKR VERSYQDPTI VITTYEGQHN  180
HHVPVNLRGS IAGIFGAQPF RIETPSFPQQ ILAQMSHPYG YGPGGSSYTD EVLRSSLHHL  240
QQQQQQFQQY ADCGLLQDIH PAAGKEEPYT YRKHPAARET PDAQYVLLLV YCAASCSLQM  300
AGKITSEMQH IRFVAEHPLR PLQDFEEDGD SELCSLLFIP SRAFSFPIST SRHPFHLLPL  360
EQDDGGFTPV SLSESPHAKP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678359899
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022879638.15e-60probable WRKY transcription factor 71
TrEMBLA0A2G9I1H78e-62A0A2G9I1H7_9LAMI; Uncharacterized protein
STRINGVIT_12s0028g00270.t015e-42(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-28WRKY DNA-binding protein 28