PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678360604

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 102aa MW: 11675.5 Da PI: 10.8345

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678360604	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.3	1.3e-11	22	49	2	30
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPk 30 prl+Wt +LH++Fv+av++LGG+e P 678360604 22 PRLKWTRDLHSCFVKAVDRLGGEE-SKPM 49 8*******************9987.4555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.0E-11	18	51	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.6E-8	22	52	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MDSPPPPSKA GRARPYVRSK TPRLKWTRDL HSCFVKAVDR LGGEESKPMQ INLSCFSRSN 60 RVILTSSMFT DNALDAHAVQ CFPYSKSRMH VPFRVWFLFQ AS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678360604

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16150	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-12	G2-like family protein