PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678360908
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family B3
Protein Properties Length: 2485aa    MW: 281436 Da    PI: 5.0261
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678360908genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.7e-1323102393190
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90  
                 f+k +++s+v+   +l lp  f++ h   ++++  ++l d +g+++e k+  +k++    l++GW++F+ +++L +gD ++F+l++ ++f
  678360908 2310 FIKPMLQSHVTGGFWLGLPLFFCRGHL--PRRDAIMSLIDDEGQQFEAKYLAQKNG----LSGGWRGFAIDHELADGDALIFQLTEPTTF 2393
                 89*********************9994..457789***************555555....9**********************9765554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.850.101.0E-16215300IPR001752Kinesin motor domain
SMARTSM001292.0E-128215522IPR001752Kinesin motor domain
PROSITE profilePS5006713.584217299IPR001752Kinesin motor domain
SuperFamilySSF525401.7E-101217546IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF002255.0E-10223299IPR001752Kinesin motor domain
PRINTSPR003801.5E-29289310IPR001752Kinesin motor domain
PROSITE profilePS5006782.192302514IPR001752Kinesin motor domain
Gene3DG3DSA:3.40.850.102.7E-88303523IPR001752Kinesin motor domain
PfamPF002251.4E-77304514IPR001752Kinesin motor domain
PRINTSPR003801.5E-29378395IPR001752Kinesin motor domain
PROSITE patternPS004110410421IPR019821Kinesin motor domain, conserved site
PRINTSPR003801.5E-29411429IPR001752Kinesin motor domain
PRINTSPR003801.5E-29464485IPR001752Kinesin motor domain
PfamPF127115.3E-29601686IPR024658Kinesin-like, KLP2
Gene3DG3DSA:2.40.330.101.8E-1423022396IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-1723042395IPR015300DNA-binding pseudobarrel domain
CDDcd100174.87E-1823082394No hitNo description
SMARTSM010196.3E-1423102407IPR003340B3 DNA binding domain
PfamPF023623.0E-1123102393IPR003340B3 DNA binding domain
PROSITE profilePS5086310.6323102401IPR003340B3 DNA binding domain
TIGRFAMsTIGR002804.4E-3223952484IPR002674Ribosomal protein L37ae
HamapMF_0032719.46823972465IPR002674Ribosomal protein L37ae
PfamPF017804.6E-3823972481IPR002674Ribosomal protein L37ae
Gene3DG3DSA:2.20.25.301.2E-4024032484IPR011331Ribosomal protein L37ae/L37e
SuperFamilySSF578293.48E-2824032475IPR011332Zinc-binding ribosomal protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000911Biological Processcytokinesis by cell plate formation
GO:0006412Biological Processtranslation
GO:0007018Biological Processmicrotubule-based movement
GO:0005840Cellular Componentribosome
GO:0003677Molecular FunctionDNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0003777Molecular Functionmicrotubule motor activity
GO:0005524Molecular FunctionATP binding
GO:0008017Molecular Functionmicrotubule binding
Sequence ? help Back to Top
Protein Sequence    Length: 2485 aa     Download sequence    Send to blast
MLRDLKFLHT NSGKSSNPEE AENTPPKSGD FALNQSSSEP PRPPLNAIQE PFRIPRGISD  60
PETGGSRAKH DKTPVKQKLG TQAPLRTPEK EGAMPKDRCN LAKKFDSSVI EVKDEVKAVS  120
TMNTPGSFRF FDRCNSSNSD CPSTQSTPTK SVNKTATPGY SITSGSRPPY SVGSRLPNYA  180
ALNKGNMGTG SFCNMVNTVE VPYFELKEDS SFWMDHNVQV LIRIRPLNSM EKSTIGFNRC  240
LKQESSQSVT WIGRPETRFH FDHVACEAID QETLFRMVGL PMVENCLSGY NSCMFAYGQE  300
EESRRDEQLK YSCKCSFLEI YNEQISDLLD PSPTNLMLRE DLKKGVYVED LSEFEVRNVG  360
DILQLLTLGS SNRRVAATNM NKESSRSHSV FTCVIESRWE KGSTTNYRFA RLNLVDLAGS  420
ERQKFSGAEG ERLKEAANIN KSLSTLGHVI MALVDIANGK PRHVPYRDSR LTFLLQDSLG  480
GNSKTVIIAN VSPSVGSAAE TLNTLKFAQR AKLIQNNAII NEDSSGDVKS LKIQIQLLKD  540
ELSALKCEKM AQPLSYGTHM ENKNDDDCDE METKEVLRIS CKQVSQREED TRCAKMMLKF  600
REDKIHRLMS VNGGLMSADD YLIRENQALS EEIQLLRSRI DKNPEVTRFA LENIRLLGKV  660
QEFQDFYDEG EREMLMAEIS ELRNQVSGYV QDENDSLRVE FFIPVFTYLC REIEEMHQVS  720
NRTPATQGHD CNMGIMTQDS ITDVTLLHST STSIFEKGRD GAIYGNLLKY EEDIMSLQLE  780
LDILKIILQD ERSSRSFMEE ILKTMSQELQ LSNEKVRSSM KECTEVQEVV TNMKLVVEAL  840
ESQQIELINE VESLKKSNDH YQGLVKEKEL EIKSLREQEE LCDLQKEVEN SKVREMESRE  900
NLEVLKIDIE ILKGHLCSRN QENEKLARKL EEKEEQLSVL MEECSSFFSE IESNMHTGNE  960
ALKDVSEQVY AIRSSFPNNE NCVIQKFGRI KASILEKELL IEELSKCLKE AVERRDDMDF  1020
MLRSLRGAVM AIIEAHQQEC SEKDREILLL TSELNNKTSA ILGLLNSKKN GEYLFDMASS  1080
CTQADNKEIV VRTQETIQEL VSGLSSLMSC LGQFLIEYGC DPGENIVEMP FSLSLVNQCQ  1140
ISQAAENNKD KSTSDAGSCP FGDDKDVSIL TLEQGADYAL RMLQSVQSQM SKLSVRKAEI  1200
TATEKCSQNI LGSLADQAIL LQNDIVNFGV ELEGRVNVMD AKIGKIENLV QQSFSSLSWR  1260
QEFLVAEADE AKALATQKIS EASSVLKKFE EVQDTMKEAD IMINELMIAN EALKLTLGEL  1320
KAKEHEVSFQ QSLLLDEIQS LNASNEQKDR QYATLENMYE TDLMAIMGMI VELENLVRDA  1380
QIALDKELAS TSTCLLSMDS QIHQSAEMRD GIFEEIWSAI VMKDCAASVL HLCHVGVMER  1440
IAVLNAENSL LRDDFTEAKT MISELQEQNF IVRRELEMSG VAKVNLFADI QQMLSMISSK  1500
LGETGEVSLK LATLAFKMQD LQHQEERMSQ GHLILGCELD KLMKELESSI KAMDVCILDR  1560
ERIAHEKDVR LQYQEEAFMI NLFAKDIGLL ILSTELEQMT FLKKDLENSC LSALNILDTF  1620
KKDVVLQGVD ATFSSLISVE QEQDNDRLLK DLERKELALQ TSFLHVTELN KKIQTLQKET  1680
NVKEALDGKD SAQKELMEAR VKIEKLEMEI SEMETAMAHM CRTTESLQIE LDTIVVQRDE  1740
LDGKFCILSR ELELARALAE DKEAVALEAQ EIAAIQKLHA EEKETEAKLL ERSIQELECT  1800
INVLERKVDI IKGEAEQQRL QREELELELL GIKEQMRNVE SNNLDVKRCV DEKEKTLQDA  1860
LRRVQLLEKE ITSRDSELSK CKSHISELNL HAEAQASEYK QKFKALEIMV EQLKSEGPTA  1920
TTHCSTSSSN KLEKSTSKPK GSGSPFKCIG MGLVQQLKSE KDEELSVGRQ RIEELETLAA  1980
SRQKEIFMLK ARLATTESMT HDVIRDLLGV KLNMKNYAEL MENQKLNPSL EDGKHKVEAD  2040
AKEQEVISLK QQLNDFVQER NGWLEEIERK QAEVMAAHIA LEKLRRQEQL FSTENDILKM  2100
ENANHKKKVM ELESEIKKLS DQQNIQQRIH HHAKIKASNC PFQDYVHVTL QRTEAILSRV  2160
EKELAQFRTA NGRSPYINFD EEQLLDKKLK ETEQERMELA QKLLRLCTSV LKAAGIKRPT  2220
SEISPSAAEE ALEHLQNKFI SLEIQLEDAK LKGRISNERA RLSELRPLAS GYSRHRDLSN  2280
RVYASDEARE HAISRAEELQ SQLDQATPSF IKPMLQSHVT GGFWLGLPLF FCRGHLPRRD  2340
AIMSLIDDEG QQFEAKYLAQ KNGLSGGWRG FAIDHELADG DALIFQLTEP TTFKAKRTKK  2400
VGIVGKYGTR YGASLRKQIK KMEVSQHSKY FCEFCGKYAV KRKAVGIWGC KDCGKVKAGG  2460
AYTLNTASAV TVRSTIRRLR EQTES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4bn2_A2e-9221852613361KINESIN-LIKE PROTEIN KIF15
4bn2_B2e-9221852613361KINESIN-LIKE PROTEIN KIF15
4bn2_C2e-9221852613361KINESIN-LIKE PROTEIN KIF15
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678360908
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGMigut.B00303.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-55B3 family protein