PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678361025
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 207aa    MW: 22220 Da    PI: 8.2226
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678361025genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.0001386108123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ykC+ C+k F++   L  H ++H
  678361025  86 YKCTVCDKAFPSYQALGGHKSSH 108
                9*************999999888 PP
2zf-C2H213.60.00019133155123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++C k+F++   L  H r+H
  678361025 133 HQCSICQKCFPTGQALGGHKRKH 155
                79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.54E-1085155No hitNo description
SMARTSM003550.008386108IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.13886113IPR007087Zinc finger, C2H2
PfamPF139125.4E-1386109IPR007087Zinc finger, C2H2
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
SMARTSM003550.054133155IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.058133155IPR007087Zinc finger, C2H2
PfamPF139121.2E-9133157IPR007087Zinc finger, C2H2
PROSITE patternPS000280135155IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MALEALNSST AAMIIPPHRV DDLDAWRKSK RSKRQRRLHD PTPEEEYLAF CLIMLARGGD  60
GNFPPAGDSD FKKSDGECSP AIGNSYKCTV CDKAFPSYQA LGGHKSSHRV KSTPANDATP  120
PLPALSLSSN KLHQCSICQK CFPTGQALGG HKRKHYDGVI GGAALKSRST SSTGDRATIT  180
AVPCSFDLNL PAWTIPHDEE VESSPAA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678361025
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088065.16e-51zinc finger protein AZF2-like
TrEMBLA0A4D9BGD64e-49A0A4D9BGD6_SALSN; Uncharacterized protein
STRINGPOPTR_0014s01760.15e-47(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7352495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43170.12e-33zinc-finger protein 3