PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678361441
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 247aa    MW: 28065 Da    PI: 5.4523
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678361441genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.92e-075796445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l +++++  G++ W  Ia+ ++ g+t+ ++k  w+
        678361441 57 FTPQEEDLVIQLHAAIGSR-WLIIAQQLQ-GKTESDVKILWN 96
                     8******************.*********.*******97776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.7749103IPR017930Myb domain
SMARTSM007171.5E-453101IPR001005SANT/Myb domain
SuperFamilySSF466893.91E-956109IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-1157110IPR009057Homeodomain-like
CDDcd001678.68E-45799No hitNo description
PfamPF002498.5E-75796IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MKMVKKGPLD EPVYATRTGI WISRSGQRRR DGNARGKFGK SDSKKQGLLP WQRTCFFTPQ  60
EEDLVIQLHA AIGSRWLIIA QQLQGKTESD VKILWNRKLR KKLSTMGIDP VTHKPFSQIL  120
ADYGNIGAMP KPHQTLPVDF KPPNAELYSQ LEALNLVMRQ KIESGEEWHI QEITKSSFEW  180
TDFLVEDVSG GTEEEEETGA MDNMKSSGFL LDEVFEACSA SSFVDAILER NKEQMFPLFP  240
LIGDEPF
Cis-element ? help Back to Top
SourceLink
PlantRegMap678361441
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071760.14e-50transcription factor MYB35-like isoform X2
TrEMBLA0A2G9G2093e-48A0A2G9G209_9LAMI; Transcription factor, Myb superfamily
STRINGMigut.I00107.1.p2e-39(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA123481922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18960.13e-28MYB_related family protein