PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678363066
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 206aa    MW: 22969.1 Da    PI: 8.9325
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678363066genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.82.7e-33141341127
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrF+Ptdee+v +yL+ k+ +++l++ ++++e+d++ ++Pw+Lp +    e++ yfFs+ +++     r++++t +g+Wk  g +k ++s  +   
  678363066  14 LPPGFRFEPTDEEIVFQYLACKTLSRPLPA-SIVPEIDVFAADPWELPGE---LERDRYFFSNMASN---MGRTKKTTCTGFWKPIGFQKLIVSPsRMPI 106
                79****************************.89***************54...46789****98775...4699999****************9855566 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                vg+kktLvfy+g+  ++++tdW++h y 
  678363066 107 VGIKKTLVFYRGKGLRASRTDWIVHVYF 134
                *************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-3911165IPR003441NAC domain
PROSITE profilePS5100541.32814167IPR003441NAC domain
PfamPF023654.1E-1815133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MPKPGFPQDA SCNLPPGFRF EPTDEEIVFQ YLACKTLSRP LPASIVPEID VFAADPWELP  60
GELERDRYFF SNMASNMGRT KKTTCTGFWK PIGFQKLIVS PSRMPIVGIK KTLVFYRGKG  120
LRASRTDWIV HVYFIALAHN KAPRSNHHFQ GSLVRLGKWV LCHVLSRNGG SHVQKNSVGQ  180
ETSDAESSFS DTESSTLDES VSSTSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-30916810169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678363066
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073111.13e-65NAC domain-containing protein 83
TrEMBLA0A2G9GSQ59e-62A0A2G9GSQ5_9LAMI; Uncharacterized protein
STRINGXP_009597132.16e-61(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-45NAC domain containing protein 83