PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678364429
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 121aa    MW: 12946.5 Da    PI: 10.0602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678364429genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-151464155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +++kGVr +k +g++v+eIr+p   g +  r +lg++ tae Aa a++ a  +l+g
  678364429 14 PKFKGVRTRK-WGKYVSEIRVP---G-StERLWLGTYSTAEAAAVAHDVAFYCLRG 64
               79*****888.**********8...4.35*********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.82E-231476No hitNo description
PfamPF008472.8E-81464IPR001471AP2/ERF domain
PROSITE profilePS5103219.5851574IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-251574IPR001471AP2/ERF domain
SMARTSM003806.3E-271580IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-171575IPR016177DNA-binding domain
PRINTSPR003673.7E-81627IPR001471AP2/ERF domain
PRINTSPR003673.7E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MSSGSSSSPT AAMPKFKGVR TRKWGKYVSE IRVPGSTERL WLGTYSTAEA AAVAHDVAFY  60
CLRGDSSPQS LNFQLSLPEG ARVGLSPRSV QRVACDAGMA VDARLRDSPP QQDQSRTAGN  120
L
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678364429
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.15e-49PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I86e-34ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2G9G8N01e-47A0A2G9G8N0_9LAMI; Uncharacterized protein
STRINGMigut.C01360.1.p2e-48(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-27ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]