PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678365027
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 258aa    MW: 29222.5 Da    PI: 9.5098
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678365027genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like461.2e-141441732655
    G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +AtPk+il+lm+  gLt+ h+kSHLQkYR 
  678365027 144 EATPKQILKLMDAGGLTIFHIKSHLQKYRN 173
                69***************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-12143174IPR009057Homeodomain-like
TIGRFAMsTIGR015573.5E-10144174IPR006447Myb domain, plants
SuperFamilySSF466891.38E-5145173IPR009057Homeodomain-like
PfamPF143797.8E-19206250IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MQHSRSFGSA LMAQELESRL LPPKLTGNEL EERDACVSSH RGLLSHMNSG AVFRNGVEDL  60
YGRPYPVLEP WTSHGFHGRH VIRLNMPPSY CSKIPPICET GLLKLKLLDH SKTPDHPAVT  120
FCFRDSQLLL PRVSQTDLLL VCIEATPKQI LKLMDAGGLT IFHIKSHLQK YRNAKSVPSS  180
SQGKRRETGT GSSSNISTQN DNHKLQIKEA LQLQLDVQRR LHEQLEIQRN LQLRIEEQAK  240
QLKLMFDIQR NAADTHQS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678365027
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022640589.12e-37myb family transcription factor PHL5 isoform X4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.19e-36G2-like family protein