PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678367735

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Trihelix

Protein Properties

Length: 130aa MW: 14334.2 Da PI: 7.1821

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678367735	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29	2.8e-09	79	117	1	38
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkm 38 rW++ e+l L+e+r+++++++r+ + +k+plW+evs+++ 678367735 79 RWPRLETLGLLEVRTRLDSKFREaNHQKAPLWDEVSRQI 117 8*******************93569*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MEHEYNNMAD PRQYIAGSRP FFAPDFMVPP HLHPHLPYPN MLAYRHDTSG MSGTALPAGV 60 GGGGMEIDAS GGGDAGAGRW PRLETLGLLE VRTRLDSKFR EANHQKAPLW DEVSRQISKP 120 FSGILTRTTF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678367735

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010243802.1	1e-19	PREDICTED: trihelix transcription factor PTL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA19695	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10000.1	3e-14	Trihelix family protein