PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678369948
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 247aa    MW: 27140.4 Da    PI: 6.8845
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678369948genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.57.4e-19954147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v+ +G ++W++I++ ++ gR++k+c++rw + 
        678369948  9 KGPWSAEEDDLLRKLVESHGARNWSLISKSIQ-GRSGKSCRLRWCNQ 54
                     79******************************.***********985 PP
2Myb_DNA-binding59.47.9e-1963105347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde++v+a++ +G++ W+tIar m  gRt++ +k++w++ 
        678369948  63 PFTAEEDEIIVRAHRVHGNR-WATIARLMT-GRTDNAVKNHWNST 105
                      89******************.********9.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.884459IPR017930Myb domain
SuperFamilySSF466891.87E-316102IPR009057Homeodomain-like
SMARTSM007172.1E-16857IPR001005SANT/Myb domain
PfamPF002491.5E-18954IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.5E-261062IPR009057Homeodomain-like
CDDcd001677.67E-161153No hitNo description
SMARTSM007178.8E-1660108IPR001005SANT/Myb domain
PROSITE profilePS5129421.33661110IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.2E-2363110IPR009057Homeodomain-like
CDDcd001672.64E-1363106No hitNo description
PfamPF002494.2E-1563105IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MAATGGRIKG PWSAEEDDLL RKLVESHGAR NWSLISKSIQ GRSGKSCRLR WCNQLSPGVE  60
HRPFTAEEDE IIVRAHRVHG NRWATIARLM TGRTDNAVKN HWNSTLKRRV AEGKGASQRA  120
SRVMKRAEGG DVSTEMVSLS PEIAPLITPE SDTPPVESSP QSDTAATDED VTDGELTALT  180
LAFPFPGGDS SEKFICSRES LLTPQPGIHK SHLLTQETVT SPEFIAVLQE MIRREVRNYL  240
SASDTNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-3981106108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678369948
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551750.18e-84transcription factor MYB44-like
SwissprotO231606e-58MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A0K1SBK43e-73A0A0K1SBK4_REHGL; R2R3-MYB protein
STRINGMigut.B00390.1.p9e-71(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79502131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.13e-60myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]