PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678374000
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 373aa    MW: 41616.3 Da    PI: 6.5805
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678374000genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.9e-12190236354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++h+e+ErrRR+riN  + +Lr+l+P++     +K++Ka+ L ++++ +k+L
  678374000 190 KSHSEAERRRRERINAHLLTLRDLIPHD-----EKMDKATLLAEVINQVKQL 236
                68*************************9.....8*************99999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.555187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9190236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-13190242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-13191240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-12193242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2604.7E-4276342No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MGTDVEMERR IGRKVDSVGN ASSLHIYVCV FVCPYEDPKS SVEGRRAFEI SCVGYAERRR  60
GSSCVAVGFG SSVGFWIVVE AEVTVLRGRY LMKFLQGEFE CRMESDMSMY CEEAYGYHFQ  120
AENRERVNPS SSSLYFNGRV EIEDWGIESK HISNDQLVLD DEKGKLEMIS TLNKGKKSVV  180
KEAKTVAAMK SHSEAERRRR ERINAHLLTL RDLIPHDEKM DKATLLAEVI NQVKQLKTTA  240
TQACKDQHIP MDSDEVKVEI LSDETLNDGH LLIQASLCCD YRPDLVSNIR KAISELSLTI  300
LKCEICTLGS RIKSVLLIAP HGGENTAAAA SVRSALSSIL SSVSASAVYD QELVYPQKRR  360
RPSLADSSSD HAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195200ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678374000
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830318.12e-71PREDICTED: transcription factor bHLH30-like
TrEMBLA0A2G9H6A19e-82A0A2G9H6A1_9LAMI; Uncharacterized protein
STRINGMigut.H01448.1.p8e-71(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-32bHLH family protein