PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678374300
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 252aa    MW: 27331.7 Da    PI: 8.204
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678374300genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.42.1e-4070129362
     zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                ++alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk++s
  678374300  70 QEALKCPRCDSANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRAS 129
                7899*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-2660122IPR003851Zinc finger, Dof-type
PfamPF027013.6E-3471127IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.53473127IPR003851Zinc finger, Dof-type
PROSITE patternPS01361075111IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MGMMMDCSSS QQVGWLSFSS FPPNMAFSSC LTMCPDFLLL QETLESILAS SSGSAAVAEQ  60
QGKKPRPADQ EALKCPRCDS ANTKFCYYNN YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG  120
GCRKNKRASA SRSSSKRAAV ARQDPTPTAG FPKQQQHASS SQGRDFGIWG SPNPELWFPD  180
SVGIADAHHQ DHPMFYEQMG IPFGGYLATT AVKQETCQES GEGSRALWGF PFGGDAGADV  240
GIGGCSTWHG LM
Cis-element ? help Back to Top
SourceLink
PlantRegMap678374300
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022875090.15e-49dof zinc finger protein DOF2.1-like
TrEMBLS8E3T44e-47S8E3T4_9LAMI; Uncharacterized protein
STRINGXP_004505949.12e-47(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-33TARGET OF MONOPTEROS 6