PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678375546
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 252aa    MW: 28066.9 Da    PI: 8.5862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678375546genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09106153455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  678375546 106 SHSLAERVRREKISERMKLLQSLVPGC----HKVTGKAVMLDEIINYVQSLQ 153
                8*************************9....566*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.69E-11100157No hitNo description
SuperFamilySSF474593.27E-17100169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.0E-17102170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.847102152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.5E-7106153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-11108158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MANSSSFQSD YPYHLLDSEL LQGSSAQKLE SSSVLLDESF KLPVSRKRKV VKKASCSSSP  60
SQSMEKKEEK KKNCKKTKDE KKGGEDAAAP AGYIHVRARR GQATDSHSLA ERVRREKISE  120
RMKLLQSLVP GCHKVTGKAV MLDEIINYVQ SLQNQVELLS MKLASVNPML YDFGMDIESF  180
MVRPDQDLNS FPSLDQGFPT METSSFNNPM EAFSPFQQQS LVLPQEEQKQ RYMMNQGGVG  240
AGAGGSNCIF YS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678375546
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022889922.12e-63transcription factor bHLH137-like
TrEMBLA0A2G9FYC13e-66A0A2G9FYC1_9LAMI; Uncharacterized protein
STRINGMigut.O00350.1.p1e-61(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41162345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.28e-50bHLH family protein