PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678377521
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 189aa    MW: 21046.9 Da    PI: 7.8617
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678377521genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like58.31.7e-18113165155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k+rl W++eLH +Fv+ave+L G+  +tPk+ile+m  + + + +v+SHLQ YR 
  678377521 113 KKRLFWNEELHGKFVKAVEKL-GIG-TTPKKILEFMADPRVKRRQVASHLQTYRK 165
                68*******************.666.8***************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-19111166IPR009057Homeodomain-like
SuperFamilySSF466891.08E-12111166IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-18113165IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MPCSSLTAAL ASLRDEIDQV IVLLSVDGEF KKIEKEAAPD NVPVLGQRRA LCFCYDIGLP  60
MPELCSVMNQ YIREEKTGDI EGAPSNPPTG TSQRRSFEST NREVESVDGS HKKKRLFWNE  120
ELHGKFVKAV EKLGIGTTPK KILEFMADPR VKRRQVASHL QTYRKQIGYT TASQSLDGST  180
TECSSNQPI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678377521
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.12e-14response regulator 14