PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678378606
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 304aa    MW: 33354.7 Da    PI: 9.2987
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678378606genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.35.8e-32234291359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dpk++++tYegeHnh+
  678378606 234 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPKMLIVTYEGEHNHT 291
                99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.1E-15187230IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.807.3E-34220292IPR003657WRKY domain
PROSITE profilePS5081131.605227293IPR003657WRKY domain
SuperFamilySSF1182902.75E-27229292IPR003657WRKY domain
SMARTSM007741.9E-38232292IPR003657WRKY domain
PfamPF031062.0E-27234290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAVELLSGCR SRSLVSQPDQ EPALPDLRRV DNLISFFSSQ EGSHAPAAGM MGDDGAAVDR  60
CKSTYSVLNR NRTGHARFRR GPVNASDSST CLESEVAGGG GGEREFDRKI YCPTPIQQVA  120
PLDYHLKLGG DFKESPKSES IRLSYSPEPS RATSFVSGRE TENGKQLTQS FCGFPSSVVG  180
PAVSAVKKRC SLSENAKCSG SSCRCHCSKR RKMRVKRAIR VPAISMKMAD IPPDDYSWRK  240
YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERALDDPKML IVTYEGEHNH TMTETPNSMV  300
LESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22220292273WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678378606
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764184.15e-92PREDICTED: probable WRKY transcription factor 7
RefseqXP_016479490.15e-92PREDICTED: probable WRKY transcription factor 7
TrEMBLA0A2G9GAI07e-92A0A2G9GAI0_9LAMI; Uncharacterized protein
STRINGXP_009764184.12e-91(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-65WRKY DNA-binding protein 7