PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678382871
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 95aa    MW: 10915.3 Da    PI: 7.4535
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678382871genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-093160130
               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
        HLH  1 rrrahnerErrRRdriNsafeeLrellPka 30
               r+r+hn+ Er RR+ri + +++L+ llP++
  678382871 31 RKRNHNAGERDRRKRISHLYSTLKGLLPPD 60
               7999************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.76E-72767IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.5153084IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.99E-63163No hitNo description
Gene3DG3DSA:4.10.280.103.3E-73162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-63160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MFPALSEHLR GDLLGDSGAP LWSRWSKSQI RKRNHNAGER DRRKRISHLY STLKGLLPPD  60
EQSVSQLTSC VLEYHDSVTL CKEQCDYRVV VCDDD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13044RKRNHNAGERDRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678382871
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.27e-09basic helix-loop-helix protein 100