PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678385030

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

VOZ

Protein Properties

Length: 514aa MW: 57392 Da PI: 6.3807

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678385030	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	395.2	1.6e-121	221	440	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 ppp aflgpkcalwdc+rpa +w q dycs++ha la eg +g p++rp+gi+lkd+llfaal+ak+ gk+vgip+cegaatakspwna+elfd 678385030 221 PPPIAFLGPKCALWDCPRPALCLDWSQksdDYCSMYHAGLAPSEGYLGRPPIVRPGGIGLKDNLLFAALEAKALGKNVGIPKCEGAATAKSPWNASELFD 320 89******************999764559***************************************************************** PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksak 197 l++l+ etirewlffdkprrafesgnrkqrslpdysgrgwhesrkqv+ +fgglkrsyymdpqp+++fewhlyeyein +d++alyrle+k +d+kk +k 678385030 321 LTMLDHETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVVSDFGGLKRSYYMDPQPMENFEWHLYEYEINRYDSCALYRLEVKRSDGKKPPK 420 ************************************************************************************************ PP VOZ 198 gkvskdsladlqkklgrlta 217 gk+s d++adlqk++ rlta 678385030 421 GKISYDTVADLQKQMRRLTA 440 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence Send to blast
MFEGGFGHRK WFVRFDRMGK DSKSGACKSA SHQLFKDRAK TRLDDLQGMF MSLQYARKES 60 CAVDMALLEE QVNLLLREWQ AELNEPSPAS SQQQGGSLGF SSDICRLLQL CEEEDDATSA 120 LVPPKPDPDA GRVVDVYAPP EAINVAGCAQ ELGLKFADES KSANDGFSSM GIGGLPSETQ 180 LDYSSFEFHS GFGTHCIPGF DGLDFDGDGG IPHVGYQEIS PPPIAFLGPK CALWDCPRPA 240 LCLDWSQKSD DYCSMYHAGL APSEGYLGRP PIVRPGGIGL KDNLLFAALE AKALGKNVGI 300 PKCEGAATAK SPWNASELFD LTMLDHETIR EWLFFDKPRR AFESGNRKQR SLPDYSGRGW 360 HESRKQVVSD FGGLKRSYYM DPQPMENFEW HLYEYEINRY DSCALYRLEV KRSDGKKPPK 420 GKISYDTVAD LQKQMRRLTA EFQNDKPRIS KGRAKTNLLQ SGTTPAQGFD HQLPWVGFWL 480 VNLWLAASEV FVVPKAHPLL LPFAAWHVIL TRRV

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence Send to blast

MFEGGFGHRK WFVRFDRMGK DSKSGACKSA SHQLFKDRAK TRLDDLQGMF MSLQYARKES  60
CAVDMALLEE QVNLLLREWQ AELNEPSPAS SQQQGGSLGF SSDICRLLQL CEEEDDATSA  120
LVPPKPDPDA GRVVDVYAPP EAINVAGCAQ ELGLKFADES KSANDGFSSM GIGGLPSETQ  180
LDYSSFEFHS GFGTHCIPGF DGLDFDGDGG IPHVGYQEIS PPPIAFLGPK CALWDCPRPA  240
LCLDWSQKSD DYCSMYHAGL APSEGYLGRP PIVRPGGIGL KDNLLFAALE AKALGKNVGI  300
PKCEGAATAK SPWNASELFD LTMLDHETIR EWLFFDKPRR AFESGNRKQR SLPDYSGRGW  360
HESRKQVVSD FGGLKRSYYM DPQPMENFEW HLYEYEINRY DSCALYRLEV KRSDGKKPPK  420
GKISYDTVAD LQKQMRRLTA EFQNDKPRIS KGRAKTNLLQ SGTTPAQGFD HQLPWVGFWL  480
VNLWLAASEV FVVPKAHPLL LPFAAWHVIL TRRV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678385030

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096373.2	0.0	transcription factor VOZ1, partial
Swissprot	Q9SGQ0	1e-179	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A4D8ZHY0	0.0	A0A4D8ZHY0_SALSN; Uncharacterized protein
STRING	Migut.M01093.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-162	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]