PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678386131
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family HB-other
Protein Properties Length: 813aa    MW: 89921.9 Da    PI: 7.743
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678386131genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.81.4e-0670126157
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
   Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                +r+R  ++++ ++ ++ +F  +  +s++e +e++++ g+t +qV+ +F  +R + +k
  678386131  70 KRPRDLMNPKAIKYMQYVFSIKDSISKRETREISARFGVTSTQVRDFFTGQRSRVRK 126
                799**************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.2E-566121IPR009057Homeodomain-like
PROSITE profilePS500719.73467127IPR001356Homeobox domain
SMARTSM003890.008669131IPR001356Homeobox domain
SuperFamilySSF466891.07E-569128IPR009057Homeodomain-like
CDDcd000860.0013970126No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    Send to blast
MESITEDQLM ELAVVPSATS YGELLEAQRE LLLNQMEKLQ ELVAVQCKLT GVNPLSQEMA  60
AGALSIKIGK RPRDLMNPKA IKYMQYVFSI KDSISKRETR EISARFGVTS TQVRDFFTGQ  120
RSRVRKLARL SGERSNKCDL LPSTSGYDEA MEQPIPLNTI IPSTVEEGAS NSKGNDILSE  180
VEKSDLHFTK NIFSSMRKEE SYGEQVKLLR WILRIKNPSV LDCIREVMDG ESWDFKDENA  240
ALSMGLLCDN PDKLRKSLPA QPLKLLAAPA DETDKKRGVL PSYTRERRKV QILEQPGQKA  300
TSRNAHSSKT ALAPQSRPLS ADDIQKAKMR AQFMQSKYGK AASSAEKKTE NQNGSSVSVG  360
LPSSVPKSLE GNQIEEEKKI GSDESISVSN LQEVQPPKVD VPPPKTRKKE KILWRMPLEI  420
KVSEDWHVAT GESSKEVEVQ NNRTRREREV IYRSLQEIPS NPREPWDREM DHDDSLTPQI  480
PIEQLPDIEP EETPSVLPNE REDYTASVAS TSSAVAAAPD PELLTALLLN PDLVFALTSG  540
KVGAVSSEDI VKLLDVIKSS GQNLTSNAAA LPRNTCKVEV SLPSPTPSSS TAPNGLKPEL  600
PSNPFSRQHN SSISTGYLAT GAAPLQGRSY APAPVGAASR RAEPEYGYGQ LQQQQQWDLT  660
HHHISSGLNS SNTHHLTTTV ASSHWAAPSV DVRLSAPPAR AHHIQLQTPN LVQSSYLPEH  720
LVPSKHQFQN NQTLNNYRIQ PGGGVVQGNW SPESHRQHEY LPGQYYNQAG SSLLQGQRPE  780
RASNAQAAQQ QHPFGYRDPS LSGAATRRWP DRR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678386131
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079715.11e-130homeobox protein LUMINIDEPENDENS
TrEMBLA0A2N9E1501e-135A0A2N9E150_FAGSY; Uncharacterized protein
STRINGMigut.D00183.1.p1e-118(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52402123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.22e-60HB-other family protein