PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678387094
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 513aa    MW: 58191.1 Da    PI: 6.2946
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678387094genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1837e-5761341129
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + +
  678387094   6 LPPGFRFHPTDEELVAYYLKRKINGQKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDMEWYFFSCRDRKYPNGSRTNRATKAGYWKATGKDRKVSS-NMR 103
                79****************************.99***************6435566888*************************************9.999 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                +vg+kktLv+y+grap+g +tdWvmheyrle
  678387094 104 AVGMKKTLVYYRGRAPHGARTDWVMHEYRLE 134
                *****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-644156IPR003441NAC domain
PROSITE profilePS5100559.9276156IPR003441NAC domain
PfamPF023651.1E-297133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING QKIDLEIIPE VDLYKCEPWD LPGKSLLPSK  60
DMEWYFFSCR DRKYPNGSRT NRATKAGYWK ATGKDRKVSS NMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLEEGECET SSGLQDTYAL YRVFKKSLNP SKTEDRYVGA SASDCERKFD  180
DGDPDSSTFP GSSDDPGWGP YLSEEEFEFS FSNMYGSASS STPYTPCRVN VEVECSRFQN  240
RFSQPPLEVQ DFPAAYGNPM IAGGCNVYTG NENQRNDIVQ EILAFAQTSQ ELNDSHLQGA  300
ATLHGIFSGT DELTSYLHGN LPAEPPYDHG PQVHRAIEIR GNEQAFRFPE NMHWIGISDE  360
ELEKAFPVES NTLQIHSSSF SNVQGEEHHA ETHTDTFAGD ATRPDLSVNL GGSFSEYEAK  420
PQVSLGMLVS TRQPPQTLYH ELVPSRTLQV QMNPKRMNHQ HIPITMHRNM SLQERLVSLI  480
RNTVAGLRMM RSQKFAFALV LWSFWIPHHK PCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-54116212171NO APICAL MERISTEM PROTEIN
1ut4_B7e-54116212171NO APICAL MERISTEM PROTEIN
1ut7_A7e-54116212171NO APICAL MERISTEM PROTEIN
1ut7_B7e-54116212171NO APICAL MERISTEM PROTEIN
4dul_A7e-54116212171NAC domain-containing protein 19
4dul_B7e-54116212171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678387094
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096933.11e-173NAC domain-containing protein 45
TrEMBLA0A2G9GMX51e-162A0A2G9GMX5_9LAMI; Uncharacterized protein
STRINGMigut.K00745.1.p1e-155(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-124NAC domain containing protein 28