PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678392851
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 568aa    MW: 62516.1 Da    PI: 6.4526
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678392851genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.4e-29410468259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs+fprsYYrC+s+ gC ++k+ve+s +dp  ++itY+ eH h+
  678392851 410 SDMWAWRKYGQKPIKGSPFPRSYYRCSSSkGCLARKQVEQSCTDPGKFIITYTAEHSHS 468
                79*************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.50.50.607.1E-1353141IPR023753FAD/NAD(P)-binding domain
SuperFamilySSF519052.43E-3253229IPR023753FAD/NAD(P)-binding domain
PfamPF079929.6E-2456242IPR023753FAD/NAD(P)-binding domain
PRINTSPR003686.2E-95776No hitNo description
PRINTSPR003686.2E-9139157No hitNo description
Gene3DG3DSA:3.50.50.606.2E-24142243IPR023753FAD/NAD(P)-binding domain
PRINTSPR003686.2E-9185203No hitNo description
Gene3DG3DSA:2.20.25.801.9E-29396470IPR003657WRKY domain
PROSITE profilePS5081131.536404470IPR003657WRKY domain
SuperFamilySSF1182907.72E-25405470IPR003657WRKY domain
SMARTSM007748.5E-34409469IPR003657WRKY domain
PfamPF031065.9E-24411467IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MAGISNVLQL RHGISLWCPQ FTPVNQISWN NGVVLASCHR RFSVSASSFA NENREFVIVG  60
GGNAAGYAAR TFVEHGFADG RLCIVSKEGF HTCVGSGGER QNPEWYVEKG IEILYEDPVI  120
DIDIQKQILR TNSGKLLKYG SLIIATGCTA SRFPDKLGGS LPGVHYIRDI EDANSLISAL  180
GKAKKVVIVG GGYIGMEVAA AAAGWKLDTT MIFPEDHLMK RLFTPSLAHK YEQLYEGCGV  240
KLVKDPPPPF ISFPNNLRQM GGFQADAEDW SLGAIVRGSS NDLSKVEDVQ TNSGNPDAPG  300
FAGDDQGFLA GFPEIFEVPA GPCDDLEDLY KQFYQVSHPL PSCTILDFQE QKAQNGEEEL  360
KPARDASDHS SGSTSSASRV TDSGYTPKYK RRKNHQKRVV IQVSADGITS DMWAWRKYGQ  420
KPIKGSPFPR SYYRCSSSKG CLARKQVEQS CTDPGKFIIT YTAEHSHSQP TRRNSLAGTV  480
RQKFPASKTS DESKSINATM KSTKEESQVA ENEIRIKEES LEDYNDIAMS ELLFDDDFFP  540
ELDDLIKNAP SPTGYDSSSH QLSLKSRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5jci_A5e-36362447243Os09g0567300 protein
5jck_A5e-36362447243Os09g0567300 protein
5jcm_A6e-365524424241Os09g0567300 protein
5jcm_B6e-365524424241Os09g0567300 protein
5jcn_A6e-365524424241Os09g0567300 protein
5jcn_B6e-365524424241Os09g0567300 protein
Cis-element ? help Back to Top
SourceLink
PlantRegMap678392851
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261339.11e-119PREDICTED: monodehydroascorbate reductase 5, mitochondrial
TrEMBLA0A4D9AHI61e-119A0A4D9AHI6_SALSN; Uncharacterized protein
TrEMBLA0A4D9ALB51e-119A0A4D9ALB5_SALSN; Uncharacterized protein
STRINGXP_010261339.11e-119(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-44WRKY family protein