PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678396907
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WOX
Protein Properties Length: 176aa    MW: 20289.3 Da    PI: 9.8514
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678396907genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.46.6e-20666257
               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
               +kR+++t+eq+ +Leel+ +  r+p+a+++++++++l    +++ ++V++WFqN++a++++
  678396907  6 SKRWCPTPEQVMILEELYTRgLRTPNAAQIQKITAHLavygRIQGKNVFYWFQNHKARDRQ 66
               69*****************99*************************************996 PP
2Wus_type_Homeobox117.18.3e-38667364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW+PtpeQ++iLeely++GlrtPn+++iq+ita+L+ yG+i++kNVfyWFQN+kaR+rqk
          678396907  6 SKRWCPTPEQVMILEELYTRGLRTPNAAQIQKITAHLAVYGRIQGKNVFYWFQNHKARDRQK 67
                       79***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.799267IPR001356Homeobox domain
SMARTSM003892.1E-4471IPR001356Homeobox domain
PfamPF000461.7E-17666IPR001356Homeobox domain
CDDcd000865.71E-5767No hitNo description
Gene3DG3DSA:1.10.10.601.4E-7766IPR009057Homeodomain-like
SuperFamilySSF466894.71E-11767IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MHTISSKRWC PTPEQVMILE ELYTRGLRTP NAAQIQKITA HLAVYGRIQG KNVFYWFQNH  60
KARDRQKLRR KIQKQLHQNH VIEELELAPP CNPFFQNLRS PTAAAHLPYL QHYPAESVGY  120
QGARICDEGP EGVARRSQAW PLMISYGPIF PCCNRSRPLR TLPLFPIRSD EETGAS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678396907
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089388.13e-46WUSCHEL-related homeobox 3-like
TrEMBLA0A2R6PQA01e-41A0A2R6PQA0_ACTCH; WUSCHEL-related homeobox like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29591951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-39WOX family protein