PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678397902
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Nin-like
Protein Properties Length: 104aa    MW: 11184.6 Da    PI: 7.1828
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678397902genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK54.91.7e-173781650
     RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
               s+e++s+ Fs ++ dAA +Lgv+++vLK  C ++G+ RWP+Rki+
  678397902 37 SFEEVSAVFSCTLSDAAESLGVSPSVLKNVCYENGLVRWPYRKIA 81
               699****************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.90122103IPR003035RWP-RK domain
PfamPF020424.9E-173881IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MGTTQNSTPY QNRSQPTNTN PSPSPNPVSA QAPKVPSFEE VSAVFSCTLS DAAESLGVSP  60
SVLKNVCYEN GLVRWPYRKI AGGKTIEEIK KEAAMEKEAH CPAM
Cis-element ? help Back to Top
SourceLink
PlantRegMap678397902
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082903.16e-37uncharacterized protein LOC105165548
TrEMBLS8C4V61e-29S8C4V6_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000202961e-26(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107441921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.25e-09Nin-like family protein