PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678401286
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 291aa    MW: 32016 Da    PI: 7.0756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678401286genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.6e-051832231055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                + R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  678401286 183 KVRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 223
                56778999**********998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.782173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-11183236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-5183227No hitNo description
Gene3DG3DSA:4.10.280.102.9E-9187230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MDSAAHGHHL SSSSSATSSS PCYGLDTSSH AWTATNYSIL DTNGFHCIQP SMAQDLSFQW  60
LDTHKFHEHP MNRIQLPPPN QTLLPDTYYF NHGITAEAPC SFDSMSSEAL DLLPCPRFSR  120
IFDPDSSQIQ IGITGDGFNY IPPSLSTSYK VFASSNGGDG DMKKSNTFKK PRLENRSHCT  180
PLKVRKEKLG DRIAALQQLV APFGKTDTAS VLMEAIGYIK FLQNQVETLS VPYVRASRVK  240
TTRPIKHDGE SEETKRDLKS RGLCLVPLSC LSYIDDCGAA AVWPPAYYGG A
Cis-element ? help Back to Top
SourceLink
PlantRegMap678401286
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083625.11e-73transcription factor bHLH110 isoform X1
RefseqXP_020550876.14e-74transcription factor bHLH110 isoform X3
TrEMBLA0A2G9HWJ12e-70A0A2G9HWJ1_9LAMI; Uncharacterized protein
STRINGMigut.C00762.1.p2e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75332227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-48bHLH family protein