PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678404507
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 546aa    MW: 58463.1 Da    PI: 6.892
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678404507genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.4e-31217274260
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers   ++++ei+Y+g+H+h+k
  678404507 217 DDGYNWRKYGQKLVKGSEFPRSYYKCTFPNCEVKKIFERSP-SGQITEIVYKGSHDHPK 274
                8****************************************.9**************85 PP
2WRKY106.41.5e-33385443159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+v+g+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnhe
  678404507 385 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNSGCPVRKHVERASHDPKAVITTYEGKHNHE 443
                59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-25214275IPR003657WRKY domain
SuperFamilySSF1182904.84E-24214275IPR003657WRKY domain
SMARTSM007745.3E-33216274IPR003657WRKY domain
PfamPF031062.7E-23217273IPR003657WRKY domain
PROSITE profilePS5081122.297217275IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-37370445IPR003657WRKY domain
SuperFamilySSF1182903.14E-29377445IPR003657WRKY domain
PROSITE profilePS5081138.434380445IPR003657WRKY domain
SMARTSM007747.7E-39385444IPR003657WRKY domain
PfamPF031063.1E-26386443IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MEGCHSLPNT ELSPREVPVF HPPDQVADAA VGSTSGAKYR LMSPAKLPIS RSACITIPPG  60
LSPTAFLDSP VLLSDIKAEP SPTTGSFFKP QAMLGSGQNA AVPLENHYPT SKDINSGSSS  120
SFEFRFHTGA SSTSGSESTG VSIPPGLAKM RSTSNQDQSY MHPPSASSAP AGEDAPFCKA  180
SATDEFSQEG TLSRGIQASS SDHKDGIWSA GGDRTSDDGY NWRKYGQKLV KGSEFPRSYY  240
KCTFPNCEVK KIFERSPSGQ ITEIVYKGSH DHPKPQAARR HNSGVVVPAH EDKMNKVLPL  300
SGHEDKFNSS NLEQNGSPGV SLLQANEEGL EGAGSQLPGS TEDAQEDDPF IKRRKLEDCM  360
DVTPVVKPIR EPRVVVQTVS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNSGCPVRK  420
HVERASHDPK AVITTYEGKH NHEVPTAKSS NHDFPGSAPP PYGGGSKLSA QDHAPISLDL  480
GVGMRTSEPV QGAVESVPAL AAVHATPEPG CYGTLTNTYG VRESPAVLPS NQCPPMQTVG  540
RILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-36217445877Probable WRKY transcription factor 4
2lex_A5e-36217445877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678404507
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095503.10.0probable WRKY transcription factor 20
SwissprotQ93WV01e-142WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A0D5Y9D00.0A0A0D5Y9D0_SALMI; WRKY protein
STRINGMigut.M01679.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40252344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-145WRKY family protein