PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678405046

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 279aa MW: 30448.9 Da PI: 8.7255

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678405046	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.5	6.2e-38	41	100	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lr+vPvGgg rknk+ 678405046 41 QSAALKCPRCDSVNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRDVPVGGGFRKNKRG 100 56789****************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.9E-33	44	99	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-25	44	99	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.152	45	99	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	47	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MPLQDIAQQA AGVGRGVGDG DGGRFFGRDR RTRPPQSHVQ QSAALKCPRC DSVNTKFCYY 60 NNYNLSQPRH FCKSCRRYWT KGGVLRDVPV GGGFRKNKRG SHKSGDMKGR IISKAHTRSF 120 AVLPSEPPAV KTATESATYT SPVSSDAVSY NNNDTNNNRN TCYSDSQFFS FNAHPPLVAP 180 STAERHIPQP VITGSENLIP PPIAAGLESQ AASFCADAFG RRELKGGMNQ DVCRVTTEWM 240 SGGGVEEEGA LIDLTAATAY WSHHQWTYSS DPPSLDFLP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678405046

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	6e-34	DOF zinc finger protein 1