PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678412069
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 128aa    MW: 13860.5 Da    PI: 9.4326
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678412069genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-151161155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               ++y GVr +k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+g
  678412069 11 TKYNGVRSRK-WGKWVSEIRVP---G-TpDRLWLGTYASPEAAAVAHDVAQYCLRG 61
               69*****888.**********8...3.58*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-91161IPR001471AP2/ERF domain
CDDcd000181.81E-221171No hitNo description
SMARTSM003809.8E-251277IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-241271IPR001471AP2/ERF domain
PROSITE profilePS5103219.9021271IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-161271IPR016177DNA-binding domain
PRINTSPR003671.1E-71324IPR001471AP2/ERF domain
PRINTSPR003671.1E-73551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MSTHNSNNAP TKYNGVRSRK WGKWVSEIRV PGTPDRLWLG TYASPEAAAV AHDVAQYCLR  60
GDASPQRFNF PLVLPAGARF GLSPRTVQRV ASEAGMAVDA RLQGSKQMYG GSYSGGPESL  120
DISVDDYL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678412069
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.14e-55PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I81e-35ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A022Q2959e-54A0A022Q295_ERYGU; Uncharacterized protein
STRINGMigut.C01360.1.p2e-54(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.15e-38ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]