PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678419750
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 177aa    MW: 19765.4 Da    PI: 6.9308
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678419750genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.7e-094262346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
        678419750  4 RWSIIAAQLP-GRTDNDIKNHWNT 26
                     6*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.59132IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-11335IPR009057Homeodomain-like
SuperFamilySSF466897.18E-8333IPR009057Homeodomain-like
CDDcd001671.48E-6428No hitNo description
PfamPF002491.7E-6426IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MKCRWSIIAA QLPGRTDNDI KNHWNTKLKK KLMGMAMAKL PVTTLHGGSP INIPPQFFNF  60
RGPSSFTAFP PRDVEIPGFY FQHQNQTTLQ SYYTWLMKKS CSSSEGSFGF EEMGNGRIGH  120
FQGFAPSPAI DEKAALLDPL SAIFEQKPDY EANLLECDSQ EVIANGSVFD FEGKAYG
Cis-element ? help Back to Top
SourceLink
PlantRegMap678419750
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1829833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-09myb domain protein 36