PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678419758

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

MYB_related

Protein Properties

Length: 99aa MW: 11414 Da PI: 8.049

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678419758	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.4e-09	14	47	1	33
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgk 33 +g+W++eEd +l d ++++G+g +W + +++ gk 678419758 14 KGPWSPEEDAKLRDFIERYGTGgNWIALPQKAGK 47 79************************99999993 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-10	5	46	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.19E-7	8	46	IPR009057	Homeodomain-like
PROSITE profile	PS50090	6.864	9	49	IPR017877	Myb-like domain
Pfam	PF00249	4.7E-7	14	46	IPR001005	SANT/Myb domain
CDD	cd00167	0.00215	16	38	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 99 aa Download sequence Send to blast
MGRAPCCDKA NVKKGPWSPE EDAKLRDFIE RYGTGGNWIA LPQKAGKQKQ KLSSGFVCSL 60 LTTGWGFFEI VFRIEEMWKE LQTEMAELSE TQHQAWRFQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678419758

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12	24	2154

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	3e-27	MYB family protein