PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678420865
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 170aa    MW: 18789.7 Da    PI: 7.746
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678420865genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.18.2e-381774461
     zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
               +a +cprC s ntkfCy+nnyslsqPryfCk+CrryWtkGGalrnvPvGgg+rk++++
  678420865 17 SAPTCPRCASPNTKFCYFNNYSLSQPRYFCKSCRRYWTKGGALRNVPVGGGCRKSRRT 74
               5678***************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-261473IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.5931973IPR003851Zinc finger, Dof-type
PfamPF027015.6E-321973IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102157IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MASFTGGANR RPIGAESAPT CPRCASPNTK FCYFNNYSLS QPRYFCKSCR RYWTKGGALR  60
NVPVGGGCRK SRRTAKKDVP SAVDQGVFTV TPVNIPVSSW AIDGGKADTW DVKIDGQDEG  120
ESSKQSKGVD FADFGYQEST AQVRDYELVW HDDDVDQPLF SNNWSFDFSG
Cis-element ? help Back to Top
SourceLink
PlantRegMap678420865
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019266430.11e-34PREDICTED: dof zinc finger protein DOF3.2-like
TrEMBLA0A314L0R92e-33A0A314L0R9_NICAT; Dof zinc finger protein dof3.5
STRINGXP_009782595.12e-33(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-34Dof family protein