PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678421636
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 393aa    MW: 43402.6 Da    PI: 7.7264
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678421636genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1183.7e-3790149261
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                +e +l+cprCds++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP G+grrk k+s
  678421636  90 PEPILPCPRCDSRDTKFCYFNNYNTNQPRHFCKSCQRYWTAGGTMRNVPFGAGRRKIKHS 149
                677899**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-2684147IPR003851Zinc finger, Dof-type
PfamPF027018.9E-3193148IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.93194148IPR003851Zinc finger, Dof-type
PROSITE patternPS01361096132IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MPEVKDPRIK LFGKTIELPE ICHLTREAYP TSKDGRSSAN QEAPESEKIM GGQSEVMMPG  60
EDGSRFLSVA SETEDQAETD VSPEGSLKKP EPILPCPRCD SRDTKFCYFN NYNTNQPRHF  120
CKSCQRYWTA GGTMRNVPFG AGRRKIKHSG VQLRRVTIPG GLQMGVDHPN HSPACESAVY  180
SLDIDDEKVE NSPTNGFHRI REIGSLGHSA SKEDDPSSES SIPSSRGEVI GRKGLQEQMP  240
SCLPQIPCFP GSLWPYQWHS VPWSSPPSPS AFAYGSFPLQ VYSAAPWTSP LIIPPVPCPS  300
TYSPTLGKHP RDVNSQRERV KPVPKSLKTD GSLDAAKIYE HRVDYSAGGI SNLFRSFQSQ  360
SKDKKEAPEN ETSTVLKANP AALSRSIRFH ENS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678421636
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098639.11e-104cyclic dof factor 2-like
TrEMBLA0A4D8YF351e-100A0A4D8YF35_SALSN; Dof zinc finger protein DOF5.5
STRINGEOY034873e-81(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47500.16e-58cycling DOF factor 3