PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678422718
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Trihelix
Protein Properties Length: 325aa    MW: 35828.5 Da    PI: 10.0865
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678422718genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix636.6e-2040131187
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf...erspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqlea 87 
                +W+ +e+ aLi+a+r+++ +lrrg+l++++W+ev++ +++r      ++++qC++k+e+l+kry++  +++  +    + ss++++f++++a
  678422718  40 CWSAEETVALIDAYRDKWYSLRRGNLRANHWQEVADDVASRCPaipPKTAVQCRHKMEKLRKRYRADIQRAVAHggVRRFSSSWVHFQKMHA 131
                7*************************************5554312578*****************987776665447999**********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.2E-2039132No hitNo description
PROSITE profilePS500906.35341100IPR017877Myb-like domain
SMARTSM005952.0E-1148137IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MATIVSPSSP SNPDDDLLPT ATLALPSAGA ASSRRLPPPC WSAEETVALI DAYRDKWYSL  60
RRGNLRANHW QEVADDVASR CPAIPPKTAV QCRHKMEKLR KRYRADIQRA VAHGGVRRFS  120
SSWVHFQKMH AMERGPNPNP TPPSSSDEEE DQHQNSVKRI RDLYSQNHKA VSVAQVPEST  180
NGASGGFRIK IPGGMNSAPR VPKFDLPNSR FSNSVPGVNG GGSSKAMKDS FGGFREMEKR  240
GTEINKASPG FDEVIAAIHS LGEGFARSEM AKMEMLKQID QMRLESERKR TEMIMECQQM  300
ILEALSDSSA KRARRSCTPP GGSLK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678422718
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093230.11e-147trihelix transcription factor ASIL2
TrEMBLA0A2G9HZ491e-144A0A2G9HZ49_9LAMI; Transcription factor GT-2
STRINGMigut.N01727.1.p1e-120(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80282327
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-53Trihelix family protein