PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678425088
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 577aa    MW: 63985.9 Da    PI: 6.429
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678425088genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.42.3e-52101372128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                p+G+rF+Ptdeelv++yL+ k++g++ e+ ++i+e+d++k ePwdLp+   ++++++ew+fF+++d+ky++g+r nrat++gyWkatgkd++++skkg +
  678425088  10 PVGYRFRPTDEELVNHYLRLKIRGHEKEV-SAIREIDVCKQEPWDLPAlsVLESTDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRNIVSKKGLK 108
                89************************999.88***************4447778999******************************************* PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                +g+kktLvfy+grap+g++t+Wv+heyr+
  678425088 109 IGMKKTLVFYTGRAPDGKRTNWVIHEYRA 137
                ***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-584160IPR003441NAC domain
PROSITE profilePS5100555.2289160IPR003441NAC domain
PfamPF023656.5E-2710136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MAVLPAKGYP VGYRFRPTDE ELVNHYLRLK IRGHEKEVSA IREIDVCKQE PWDLPALSVL  60
ESTDNEWFFF CPKDRKYQNG QRLNRATERG YWKATGKDRN IVSKKGLKIG MKKTLVFYTG  120
RAPDGKRTNW VIHEYRATDK SLDGSQPGQG AFVLCRLFKK TELKQDDTTE ITNLTEGEEI  180
ASSPVAVKYS AEEEHSDSVT HITGAPAAAR PHGVESDHHS SCDKSMYDDV ATDLQSNSCN  240
TDEVEGCATV ALSGPLIEQP YKDLDSILGD WKILSPLHSQ MQSELGSSFH YGSFTGDVSN  300
VQYTNDVDLT DFMNSVFTDP EPVSFDGVCF PSVAGPNNMN MLPLVKDSNS CCESDSEVSQ  360
KQRHFDMVAE NIKHESSFQS EFTSQMAHYG QSAATLHVSN GYDPRNLHFG NNYHQMAPQM  420
PVPNKFEAEG PASRSGIKIR PRTSFNQSFP GNPPMQGTAP RRIRLEKKLQ VGPLECPLPK  480
KLIDNEVSHE TAGSPEELKP PAPSEPVASL PSDETEIQKH HSHSNMAVRK QGEARPPIIT  540
PYAAKPPIFS APTRRRVVVA LSLTLVLVAT VCAALLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-421016018165NO APICAL MERISTEM PROTEIN
1ut4_B2e-421016018165NO APICAL MERISTEM PROTEIN
1ut7_A2e-421016018165NO APICAL MERISTEM PROTEIN
1ut7_B2e-421016018165NO APICAL MERISTEM PROTEIN
3swm_A3e-421016021168NAC domain-containing protein 19
3swm_B3e-421016021168NAC domain-containing protein 19
3swm_C3e-421016021168NAC domain-containing protein 19
3swm_D3e-421016021168NAC domain-containing protein 19
3swp_A3e-421016021168NAC domain-containing protein 19
3swp_B3e-421016021168NAC domain-containing protein 19
3swp_C3e-421016021168NAC domain-containing protein 19
3swp_D3e-421016021168NAC domain-containing protein 19
4dul_A2e-421016018165NAC domain-containing protein 19
4dul_B2e-421016018165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678425088
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075874.10.0NAC domain-containing protein 62
TrEMBLA0A2G9G0M41e-171A0A2G9G0M4_9LAMI; Uncharacterized protein
STRINGMigut.F00136.1.p1e-164(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-85NAC 014